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Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone

  1. Edward F. DeLonga,2
  1. aDaniel K. Inouye Center for Microbial Oceanography: Research and Education, University of Hawai?i at Mānoa, Honolulu, HI 96822
  1. Contributed by Edward F. DeLong, September 17, 2017 (sent for review August 22, 2017; reviewed by Howard Ochman and Forest L. Rohwer)

  1. Fig. 2.

    Diel timing and abundance of viral transcription. (A) The red line shows average transcripts per liter of total viral transcripts analyzed in this study, with error bars denoting SE. The histogram shows the peak time of aggregate viral transcripts for individual scaffolds, and the dotplot below it provides the peak times of all scaffolds, with significantly diel scaffolds in blue and all other scaffolds in gray. (B) Viral scaffolds abundant in the transcriptomes are shown on the y axis. The shape of the plot denotes the distribution of abundances recovered in all 44 time-points. The x axis shows transcripts per liter. The dotted red lines denote the upper and lower bounds of thresholds of detection. Colored dots next to the scaffolds denote putative host designations and scaffolds for which significantly diel transcription was determined.

  2. Fig. 3.

    Diel synchrony of cyanophage and Prochlorococcus activities. Temporal profiles for diel cyanophage aggregate transcription (red), Prochlorococcus DNA replication and cell division marker gene transcription (green), and two metrics for estimating the timing of Prochlorococcus DNA replication (iRep and bPTR; blue). Units for the transcriptional profiles are ×105 transcripts per L. Night-time periods are shaded gray.

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